octantbio / octopus
markdownmaster727f8c72.5K linessynced 3h ago
Code health
9.9out of 10Excellent
This codebase scores 9.9 out of 10 on defect risk, which we rate excellent. It also scores maintainability 9.9 and static performance risk 10.0 out of 10. The three are scored separately and never blended into one number.
- Lines of code
- 2.5K
Recent activity
All commitsCommits
No commits indexed yet.
Needs attention
16 open- medium severity. ProposedValidate variant length and reference content to avoid FreeBayes loop errorAuto-proposed decision awaiting review
- medium severity. ProposedLazy FASTA parsing via generatorAuto-proposed decision awaiting review
- medium severity. Knowledge silosrc/flatten-fasta.py87% single-owner concentration
- medium severity. Knowledge silosrc/guided-assembly.sh99% single-owner concentration
- medium severity. Knowledge silosrc/jgi-denovo.sh99% single-owner concentration
Composition
Open the graphmarkdown 38%python 29%shell 17%yaml 8%dockerfile 4%Other 4%
Explore this codebase
- Docs20 pages across 5 modules
- ChatAsk this codebase a question and get an answer with its sources
- Files24 files with per-file docs, health and history
- ArchitectureDependency graph, layers, and 1 entry points
- Code healthPer-file scores, 10 open findings, coverage and refactoring targets
- Knowledge graphEntities, communities, and the paths between them
- Change couplingFiles that keep changing together, mined from commit history
- CommitsChange-risk ranked history with agent provenance
- ContributorsBus factor, per-file maintainers, and the human/agent split
- StatsSize class, origin, lifetime churn, rhythm and records
- CostsWhat indexing this snapshot cost, by model and by run